Error, noise and bias in de novo transcriptome assemblies
نویسندگان
چکیده
منابع مشابه
Evaluation of de novo transcriptome assemblies from RNA-Seq
For simplicity, we assume that RNA-Seq reads are sequenced uniformly across the transcriptome. In addition, we only consider fixed length single-end RNA-Seq reads. We denote the read length as L. Given a set of MT transcripts, we denote the relative expression levels as τ = (τ1, τ2, . . . , τMT ), the read generating probabilities as Θ = (θ0, θ1, . . . , θMT ) and the expected read coverage as ...
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ژورنال
عنوان ژورنال: Molecular Ecology Resources
سال: 2020
ISSN: 1755-098X,1755-0998
DOI: 10.1111/1755-0998.13156